The COG Project
Multi-Dimensional Scaling with SALSA Manxcat
Pages
(Move to ...)
Introduction
Stream
Downloads
Distance Analysis
Distance Analysis with Denominator Cuts
Distance Analysis of Position Specific Vs BLOSUM62
Distance Analysis of Min Max Normalized Score Vs Old Normalized Score
▼
Tuesday, December 4, 2012
Archaeal COG (arCOG) Sequence Statistics
›
Total number of sequences: 275066 https://www.sugarsync.com/pf/D6858752_0743775_7655583 Total number of unique sequences: 262206 http...
Wednesday, September 12, 2012
›
COG 183362+4872 NW PID Log(1-d^6) with Sammon Description DataSet: COG Size: 183362+4872 Unique: Yes* (5 from 4872 overlaps with...
Tuesday, May 29, 2012
COG 95672 NW PID Log(1-d^4) with Sammon
›
Description DataSet: COG Size: 95672 Unique: Yes Aligner: NeedlemanWunsch ScoringMatrix: BLOSUM62 GapOpen: -16 GapExt: -4 DistanceT...
COG 95672 NW PID Log(1-d^2) with Sammon
›
Description DataSet: COG Size: 95672 Unique: Yes Aligner: NeedlemanWunsch ScoringMatrix: BLOSUM62 GapOpen: -16 GapExt: -4 Distance...
Friday, May 25, 2012
COG 95672 NW PID Log(1-d^6) with Sammon
›
Description DataSet: COG Size: 95672 Unique: Yes Aligner: NeedlemanWunsch ScoringMatrix: BLOSUM62 GapOpen: -16 GapExt: -4 DistanceTy...
Wednesday, May 23, 2012
COG 95672 NW PID Log(1-d) with Sammon
›
Description DataSet: COG Size: 95672 Unique: Yes Aligner: NeedlemanWunsch ScoringMatrix: BLOSUM62 GapOpen: -16 GapExt: -4 Dis...
Friday, March 30, 2012
The Role of Seven Clusters
›
The 7 clusters were chosen early on as interesting ways of looking at value of transformation. They are COG0444 137 members COG4608 130 me...
›
Home
View web version
