The COG Project

Multi-Dimensional Scaling with SALSA Manxcat

Pages

  • Introduction
  • Stream
  • Downloads
  • Distance Analysis
  • Distance Analysis with Denominator Cuts
  • Distance Analysis of Position Specific Vs BLOSUM62
  • Distance Analysis of Min Max Normalized Score Vs Old Normalized Score

Downloads

  • PlotViz at http://salsahpc.indiana.edu/pviz3/index.html
    • Windows x64 at http://salsahpc.indiana.edu/pviz3/data/PVIZ3-0.8.11-win64.exe
    • Mac x64 at http://salsahpc.indiana.edu/pviz3/data/PVIZ3-0.8.7-Darwin.dmg
Email ThisBlogThis!Share to XShare to FacebookShare to Pinterest

No comments:

Post a Comment

Home
Subscribe to: Posts (Atom)

Blog Archive

  • ▼  2012 (21)
    • ▼  December (1)
      • Archaeal COG (arCOG) Sequence Statistics
    • ►  September (1)
    • ►  May (4)
    • ►  March (15)

Labels

  • 183362+4872
  • 262206
  • 50000
  • 95672
  • arCOG
  • BitScore
  • Blast
  • Chisq1
  • COG
  • NeedlemanWunsch
  • NormalizedScore
  • PercentIdentity
  • Sammon
  • SmithWaterman
  • SQRT4D
  • TM10TP2
  • TM10TP4
  • TM10TP6
  • TM12
  • TM12TP2
  • TM12TP4
  • TM12TP6
  • Untransformed

Contributors

  • Geoffrey Fox
  • SALSA HPC
  • Saliya Ekanayake
http://salsahpc.indiana.edu. Simple theme. Powered by Blogger.